# R Commander Menu Definitions # last modified 5 December 2006 by J. Fox # type menu/item operation/parent label command/menu activation install? menu fileMenu topMenu "" "" "" "" item fileMenu command "Open script file..." loadLog "" "" item fileMenu command "Save script..." saveLog "" "" item fileMenu command "Save script as..." saveLogAs "" "" item fileMenu command "Save output..." saveOutput "" "" item fileMenu command "Save output as..." saveOutputAs "" "" item fileMenu command "Save R workspace..." saveWorkspace "" "" item fileMenu command "Save R workspace as..." saveWorkspaceAs "" "" menu exitMenu fileMenu "" "" "" "" item exitMenu command "From Commander" closeCommander "" "" item exitMenu command "From Commander and R" closeCommanderAndR "" "" item fileMenu cascade "Exit" exitMenu "" "" item topMenu cascade "File" fileMenu "" "" menu editMenu topMenu "" "" "" "" item editMenu command "Clear window" onClear "" "" item editMenu command "Cut" onCut "" "" item editMenu command "Copy" onCopy "" "" item editMenu command "Paste" onPaste "" "" item editMenu command "Delete" onDelete "" "" item editMenu command "Find..." onFind "" "" item editMenu command "Select all" onSelectAll "" "" item topMenu cascade "Edit" editMenu "" "" menu dataMenu topMenu "" "" "" "" item dataMenu command "New data set..." newDataSet "" "" menu importMenu dataMenu "" "" "" "" item importMenu command "from text file or clipboard..." readDataSet "" "" item importMenu command "from SPSS data set..." importSPSS "" "packageAvailable('foreign')" item importMenu command "from Minitab data set..." importMinitab "" "packageAvailable('foreign')" item importMenu command "from STATA data set..." importSTATA "" "packageAvailable('foreign')" item importMenu command "from Excel, Access or dBase data set ..." importRODBCtable "" "(.Platform$OS.type == 'windows') && packageAvailable('RODBC')" item dataMenu cascade "Import data" importMenu "" "" menu packagesMenu dataMenu "" "" "" "" item packagesMenu command "List data sets in packages" listDataSetsInPackages "" "" item packagesMenu command "Read data set from an attached package..." readDataFromPackage "" "" item dataMenu cascade "Data in packages" packagesMenu "" "" menu activeMenu dataMenu "" "" "" "" item activeMenu command "Select active data set..." selectActiveDataSet "dataSetsP()" "" item activeMenu command "Refresh active data set" refreshActiveDataSet "activeDataSetP()" "" item activeMenu command "Help on active data set (if available)" helpDataSet "activeDataSetP()" "" item activeMenu command "Variables in active data set" variablesDataSet "activeDataSetP()" "" item activeMenu command "Set case names..." setCaseNames "activeDataSetP()" "" item activeMenu command "Subset active data set..." subsetDataSet "activeDataSetP()" "" item activeMenu command "Stack variables in active data set..." Stack "activeDataSetP() && numericP(2)" "" item activeMenu command "Remove cases with missing data..." filterNA "activeDataSetP()" "" item activeMenu command "Export active data set..." exportDataSet "activeDataSetP()" "" item dataMenu cascade "Active data set" activeMenu "" "" menu variablesMenu dataMenu "" "" "" "" item variablesMenu command "Recode variables..." Recode "activeDataSetP()" "packageAvailable('car')" item variablesMenu command "Compute new variable..." Compute "activeDataSetP()" "" item variablesMenu command "Add observation numbers to data set" addObsNumbers "activeDataSetP()" "" item variablesMenu command "Standardize variables..." standardize "numericP()" "" item variablesMenu command "Convert numeric variables to factors..." numericToFactor "numericP()" "" item variablesMenu command "Bin numeric variable..." binVariable "numericP()" "" item variablesMenu command "Reorder factor levels..." reorderFactor "factorsP()" "" item variablesMenu command "Define contrasts for a factor..." setContrasts "factorsP()" "" item variablesMenu command "Rename variables..." renameVariables "activeDataSetP()" "" item variablesMenu command "Delete variables from data set ..." deleteVariable "activeDataSetP()" "" item dataMenu cascade "Manage variables in active data set" variablesMenu "" "" item topMenu cascade "Data" dataMenu "" "" menu statisticsMenu topMenu "" "" "" "" menu summariesMenu statisticsMenu "" "" "" "" item summariesMenu command "Active data set" summarizeDataSet "activeDataSetP()" "" item summariesMenu command "Numerical summaries..." numericalSummaries "numericP()" "packageAvailable('abind')" item summariesMenu command "Frequency distributions..." frequencyDistribution "factorsP()" "" item summariesMenu command "Count missing observations" countMissing "activeDataSetP()" "" item summariesMenu command "Table of statistics..." statisticsTable "numericP() && factorsP()" "" item summariesMenu command "Correlation matrix..." correlationMatrix "numericP(2)" "" item summariesMenu command "Correlation test..." correlationTest "numericP(2)" "" menu tablesMenu statisticsMenu "" "" "" "" item tablesMenu command "Two-way table..." twoWayTable "factorsP(2)" "packageAvailable('abind')" item tablesMenu command "Multi-way table..." multiWayTable "factorsP(3)" "packageAvailable('abind')" item tablesMenu command "Enter and analyze two-way table..." enterTable "" "packageAvailable('abind')" menu meansMenu statisticsMenu "" "" "" "" item meansMenu command "Single-sample t-test..." singleSampleTTest "numericP()" "" item meansMenu command "Independent samples t-test..." independentSamplesTTest "numericP() && twoLevelFactorsP()" "" item meansMenu command "Paired t-test..." pairedTTest "numericP(2)" "" item meansMenu command "One-way ANOVA..." oneWayAnova "numericP() && factorsP()" "packageAvailable('multcomp')" item meansMenu command "Multi-way ANOVA..." multiWayAnova "numericP() && factorsP()" "" menu proportionsMenu statisticsMenu "" "" "" "" item proportionsMenu command "Single-sample proportion test..." singleProportionTest "twoLevelFactorsP()" "" item proportionsMenu command "Two-sample proportions test..." twoSampleProportionsTest "twoLevelFactorsP(2)" "packageAvailable('abind')" menu variancesMenu statisticsMenu "" "" "" "" item variancesMenu command "Two-variances F-test..." twoVariancesFTest "numericP() && twoLevelFactorsP()" "" item variancesMenu command "Bartlett's test..." BartlettTest "numericP() && factorsP()" "" item variancesMenu command "Levene's test..." LeveneTest "numericP() && factorsP()" "packageAvailable('car')" menu nonparametricMenu statisticsMenu "" "" "" "" item nonparametricMenu command "Two-sample Wilcoxon test..." twoSampleWilcoxonTest "numericP() && twoLevelFactorsP()" "" item nonparametricMenu command "Paired-samples Wilcoxon test..." pairedWilcoxonTest "numericP(2)" "" item nonparametricMenu command "Kruskal-Wallis test..." KruskalWallisTest "numericP() && factorsP()" "" menu dimensionalMenu statisticsMenu "" "" "" "" item dimensionalMenu command "Scale reliability..." Reliability "numericP(3)" "" item dimensionalMenu command "Principal-components analysis..." principalComponents "numericP(2)" "" item dimensionalMenu command "Factor analysis..." factorAnalysis "numericP(3)" "" menu clusterMenu dimensionalMenu "" "" "" "" item clusterMenu command "k-means cluster analysis..." kmeansClustering "numericP()" "" item clusterMenu command "Hierarchical cluster analysis..." hierarchicalCluster "numericP()" "" item clusterMenu command "Summarize hierarchical clustering..." hclustSummary "hclustSolutionsP()" "" item clusterMenu command "Add hierarchical clustering to data set..." appendHclustGroup "hclustSolutionsP()" "" item dimensionalMenu cascade "Cluster analysis" clusterMenu "" "" menu modelsMenu statisticsMenu "" "" "" "" item modelsMenu command "Linear regression..." linearRegressionModel "numericP(2)" "" item modelsMenu command "Linear model..." linearModel "numericP()" "" item modelsMenu command "Generalized linear model..." generalizedLinearModel "activeDataSetP()" "" item modelsMenu command "Multinomial logit model..." multinomialLogitModel "factorsP()" "packageAvailable('nnet')" item modelsMenu command "Proportional-odds logit model..." proportionalOddsModel "factorsP()" "packageAvailable('MASS')" # menu transformMenu statisticsMenu "" "" "" "" # item transformMenu command "Multivariate Box-Cox transformations..." BoxCox "numericP()" "packageAvailable('car')" item topMenu cascade "Statistics" statisticsMenu "" "" item statisticsMenu cascade "Summaries" summariesMenu "" "" item statisticsMenu cascade "Contingency tables" tablesMenu "" "packageAvailable('abind')" item statisticsMenu cascade "Means" meansMenu "" "" item statisticsMenu cascade "Proportions" proportionsMenu "" "" item statisticsMenu cascade "Variances" variancesMenu "" "" item statisticsMenu cascade "Nonparametric tests" nonparametricMenu "" "" item statisticsMenu cascade "Dimensional analysis" dimensionalMenu "" "" item statisticsMenu cascade "Fit models" modelsMenu "" "" # item statisticsMenu cascade "Transform" transformMenu "" "" menu graphsMenu topMenu "" "" "" "" item graphsMenu command "Index plot..." indexPlot "numericP()" "" item graphsMenu command "Histogram..." Histogram "numericP()" "" item graphsMenu command "Stem-and-leaf display..." stemAndLeaf "numericP()" "" item graphsMenu command "Boxplot..." boxPlot "numericP()" "" item graphsMenu command "Quantile-comparison plot..." QQPlot "numericP()" "packageAvailable('car')" item graphsMenu command "Scatterplot..." scatterPlot "numericP(2)" "packageAvailable('car')" item graphsMenu command "Scatterplot matrix..." scatterPlotMatrix "numericP(3)" "packageAvailable('car')" item graphsMenu command "Line graph..." linePlot "numericP(2)" "" item graphsMenu command "XY conditioning plot..." Xyplot "numericP(2)" "" item graphsMenu command "Plot of means..." PlotMeans "numericP() && factorsP()" "" item graphsMenu command "Bar graph..." barGraph "factorsP()" "" item graphsMenu command "Pie chart..." pieChart "factorsP()" "" menu ThreeDPlotMenu graphsMenu "" "" "" "packageAvailable('rgl')" item ThreeDPlotMenu command "3D scatterplot..." Scatter3D "numericP(3)" "packageAvailable('rgl')" item ThreeDPlotMenu command "Identify observations with mouse" Identify3D "rglLoaded() && 0 != rgl.cur() && !is.null(getRcmdr('Identify3d'))" "packageAvailable('rgl')" item ThreeDPlotMenu command "Save graph to file" saveRglGraph "rglLoaded() && 0 != rgl.cur()" "packageAvailable('rgl')" item graphsMenu cascade "3D graph" ThreeDPlotMenu "" "packageAvailable('rgl')" menu saveGraphsMenu graphsMenu "" "" "" "" item saveGraphsMenu command "as bitmap..." saveBitmap "dev.cur() != 1" "" item saveGraphsMenu command "as PDF/Postscript/EPS..." savePDF "dev.cur() != 1" "" item saveGraphsMenu command "3D RGL graph..." saveRglGraph "rglLoaded() && 0 != rgl.cur()" "packageAvailable('rgl')" item graphsMenu cascade "Save graph to file" saveGraphsMenu "" "" item topMenu cascade "Graphs" graphsMenu "" "" menu modelsMenu topMenu "" "" "" "" item modelsMenu command "Select active model..." selectActiveModel "modelsP()" "" item modelsMenu command "Summarize model" summarizeModel "activeModelP()" "" item modelsMenu command "Add observation statistics to data..." addObservationStatistics "activeModelP()" "" item modelsMenu command "Confidence intervals..." confidenceIntervals "activeModelP()" "packageAvailable('MASS')" menu hypothesisMenu modelsMenu "" "" "" "" item modelsMenu cascade "Hypothesis tests" hypothesisMenu "" "" item hypothesisMenu command "ANOVA table" anovaTable "activeModelP()" "packageAvailable('car')" item hypothesisMenu command "Compare two models..." compareModels "modelsP(2)" "" item hypothesisMenu command "Linear hypothesis..." testLinearHypothesis "(lmP() || glmP())" "packageAvailable('car')" menu diagnosticsMenu modelsMenu "" "" "" "" item modelsMenu cascade "Numerical diagnostics" diagnosticsMenu "" "" item diagnosticsMenu command "Variance-inflation factors" VIF "(lmP() || glmP())" "packageAvailable('car')" item diagnosticsMenu command "Breusch-Pagan test for heteroscedasticity..." BreuschPaganTest "lmP()" "packageAvailable('lmtest')" item diagnosticsMenu command "Durbin-Watson test for autocorrelation..." DurbinWatsonTest "lmP()" "packageAvailable('lmtest')" item diagnosticsMenu command "RESET test for nonlinearity..." RESETtest "lmP()" "packageAvailable('lmtest')" item diagnosticsMenu command "Bonferroni outlier test" outlierTest "(lmP() || glmP())" "packageAvailable('car')" menu graphsMenu modelsMenu "" "" "" "" item modelsMenu cascade "Graphs" graphsMenu "" "" item graphsMenu command "Basic diagnostic plots" plotModel "lmP() || glmP()" "" item graphsMenu command "Residual quantile-comparison plot..." residualQQPlot "lmP()" "packageAvailable('car')" item graphsMenu command "Component+residual plots" CRPlots "(lmP() || glmP())" "packageAvailable('car')" item graphsMenu command "Added-variable plots" AVPlots "(lmP() || glmP())" "packageAvailable('car')" item graphsMenu command "Influence plot" InfluencePlot "(lmP() || glmP())" "packageAvailable('car')" item graphsMenu command "Effect plots" effectPlots "(lmP() || glmP())" "packageAvailable('effects')" item topMenu cascade "Models" modelsMenu "" "" # Distributions menu distributionsMenu topMenu "" "" "" "" menu continuousMenu distributionsMenu "" "" "" "" menu discreteMenu distributionsMenu "" "" "" "" # Normal distribution menu normalMenu continuousMenu "" "" "" "" item continuousMenu cascade "Normal distribution" normalMenu "" "" item normalMenu command "Normal quantiles..." normalQuantiles "" "" item normalMenu command "Normal probabilities..." normalProbabilities "" "" item normalMenu command "Plot normal distribution..." normalDistributionPlot "" "" item normalMenu command "Sample from normal distribution..." normalDistributionSamples "" "" # t distribution menu tMenu continuousMenu "" "" "" "" item continuousMenu cascade "t distribution" tMenu "" "" item tMenu command "t quantiles..." tQuantiles "" "" item tMenu command "t probabilities..." tProbabilities "" "" item tMenu command "Plot t distribution..." tDistributionPlot "" "" item tMenu command "Sample from t distribution..." tDistributionSamples "" "" # Chi-square distribution menu chisqMenu continuousMenu "" "" "" "" item continuousMenu cascade "Chi-squared distribution" chisqMenu "" "" item chisqMenu command "Chi-squared quantiles..." chisqQuantiles "" "" item chisqMenu command "Chi-squared probabilities..." chisqProbabilities "" "" item chisqMenu command "Plot chi-squared distribution..." chisquareDistributionPlot "" "" item chisqMenu command "Sample from chi-squared distribution..." chisquareDistributionSamples "" "" # F distribution menu FMenu continuousMenu "" "" "" "" item continuousMenu cascade "F distribution" FMenu "" "" item FMenu command "F quantiles..." FQuantiles "" "" item FMenu command "F probabilities..." FProbabilities "" "" item FMenu command "Plot F distribution..." FDistributionPlot "" "" item FMenu command "Sample from F distribution..." FDistributionSamples "" "" # Exponential distribution menu exponentialMenu continuousMenu "" "" "" "" item continuousMenu cascade "Exponential distribution" exponentialMenu "" "" item exponentialMenu command "Exponential quantiles..." exponentialQuantiles "" "" item exponentialMenu command "Exponential probabilities..." exponentialProbabilities "" "" item exponentialMenu command "Plot exponential distribution..." exponentialDistributionPlot "" "" item exponentialMenu command "Sample from exponential distribution..." exponentialDistributionSamples "" "" # Uniform distribution menu uniformMenu continuousMenu "" "" "" "" item continuousMenu cascade "Uniform distribution" uniformMenu "" "" item uniformMenu command "Uniform quantiles..." uniformQuantiles "" "" item uniformMenu command "Uniform probabilities..." uniformProbabilities "" "" item uniformMenu command "Plot uniform distribution..." uniformDistributionPlot "" "" item uniformMenu command "Sample from uniform distribution..." uniformDistributionSamples "" "" # beta distribution menu betaMenu continuousMenu "" "" "" "" item continuousMenu cascade "Beta distribution" betaMenu "" "" item betaMenu command "Beta quantiles..." betaQuantiles "" "" item betaMenu command "Beta probabilities..." betaProbabilities "" "" item betaMenu command "Plot beta distribution..." betaDistributionPlot "" "" item betaMenu command "Sample from beta distribution..." betaDistributionSamples "" "" # Cauchy distribution menu CauchyMenu continuousMenu "" "" "" "" item continuousMenu cascade "Cauchy distribution" CauchyMenu "" "" item CauchyMenu command "Cauchy quantiles..." CauchyQuantiles "" "" item CauchyMenu command "Cauchy probabilities..." CauchyProbabilities "" "" item CauchyMenu command "Plot Cauchy distribution..." CauchyDistributionPlot "" "" item CauchyMenu command "Sample from Cauchy distribution..." CauchyDistributionSamples "" "" # Logistic distribution menu logisticMenu continuousMenu "" "" "" "" item continuousMenu cascade "Logistic distribution" logisticMenu "" "" item logisticMenu command "Logistic quantiles..." logisticQuantiles "" "" item logisticMenu command "Logistic probabilities..." logisticProbabilities "" "" item logisticMenu command "Plot logistic distribution..." logisticDistributionPlot "" "" item logisticMenu command "Sample from logistic distribution..." logisticDistributionSamples "" "" # Lognormal distribution menu lognormalMenu continuousMenu "" "" "" "" item continuousMenu cascade "Lognormal distribution" lognormalMenu "" "" item lognormalMenu command "Lognormal quantiles..." lognormalQuantiles "" "" item lognormalMenu command "Lognormal probabilities..." lognormalProbabilities "" "" item lognormalMenu command "Plot lognormal distribution..." lognormalDistributionPlot "" "" item lognormalMenu command "Sample from lognormal distribution..." lognormalDistributionSamples "" "" # Gamma distribution menu gammaMenu continuousMenu "" "" "" "" item continuousMenu cascade "Gamma distribution" gammaMenu "" "" item gammaMenu command "Gamma quantiles..." gammaQuantiles "" "" item gammaMenu command "Gamma probabilities..." gammaProbabilities "" "" item gammaMenu command "Plot gamma distribution..." gammaDistributionPlot "" "" item gammaMenu command "Sample from gamma distribution..." gammaDistributionSamples "" "" # Weibull distribution menu WeibullMenu continuousMenu "" "" "" "" item continuousMenu cascade "Weibull distribution" WeibullMenu "" "" item WeibullMenu command "Weibull quantiles..." WeibullQuantiles "" "" item WeibullMenu command "Weibull probabilities..." WeibullProbabilities "" "" item WeibullMenu command "Plot Weibull distribution..." WeibullDistributionPlot "" "" item WeibullMenu command "Sample from Weibull distribution..." WeibullDistributionSamples "" "" # Gumbel distribution menu GumbelMenu continuousMenu "" "" "" "" item continuousMenu cascade "Gumbel distribution" GumbelMenu "" "" item GumbelMenu command "Gumbel quantiles..." GumbelQuantiles "" "" item GumbelMenu command "Gumbel probabilities..." GumbelProbabilities "" "" item GumbelMenu command "Plot Gumbel distribution..." GumbelDistributionPlot "" "" item GumbelMenu command "Sample from Gumbel distribution..." GumbelDistributionSamples "" "" # Binomial distribution menu binomialMenu discreteMenu "" "" "" "" item discreteMenu cascade "Binomial distribution" binomialMenu "" "" item binomialMenu command "Binomial quantiles..." binomialQuantiles "" "" item binomialMenu command "Binomial tail probabilities..." binomialProbabilities "" "" item binomialMenu command "Binomial probabilities..." binomialMass "" "" item binomialMenu command "Plot binomial distribution..." binomialDistributionPlot "" "" item binomialMenu command "Sample from binomial distribution..." binomialDistributionSamples "" "" # Poisson distribution menu PoissonMenu discreteMenu "" "" "" "" item discreteMenu cascade "Poisson distribution" PoissonMenu "" "" item PoissonMenu command "Poisson quantiles..." PoissonQuantiles "" "" item PoissonMenu command "Poisson tail probabilities..." PoissonProbabilities "" "" item PoissonMenu command "Poisson probabilities..." PoissonMass "" "" item PoissonMenu command "Plot Poisson distribution..." PoissonDistributionPlot "" "" item PoissonMenu command "Sample from Poisson distribution..." PoissonDistributionSamples "" "" # Geometric distribution menu geometricMenu discreteMenu "" "" "" "" item discreteMenu cascade "Geometric distribution" geometricMenu "" "" item geometricMenu command "Geometric quantiles..." geomQuantiles "" "" item geometricMenu command "Geometric tail probabilities..." geomProbabilities "" "" item geometricMenu command "Geometric probabilities..." geomMass "" "" item geometricMenu command "Plot geometric distribution..." geomDistributionPlot "" "" item geometricMenu command "Sample from geometric distribution..." geomDistributionSamples "" "" # Hypergeometric distribution menu hyperMenu discreteMenu "" "" "" "" item discreteMenu cascade "Hypergeometric distribution" hyperMenu "" "" item hyperMenu command "Hypergeometric quantiles..." hyperQuantiles "" "" item hyperMenu command "Hypergeometric tail probabilities..." hyperProbabilities "" "" item hyperMenu command "Hypergeometric probabilities..." hyperMass "" "" item hyperMenu command "Plot hypergeometric distribution..." hyperDistributionPlot "" "" item hyperMenu command "Sample from hypergeometric distribution..." hyperDistributionSamples "" "" # Negative binomial distribution menu negbinomialMenu discreteMenu "" "" "" "" item discreteMenu cascade "Negative binomial distribution" negbinomialMenu "" "" item negbinomialMenu command "Negative binomial quantiles..." negbinomialQuantiles "" "" item negbinomialMenu command "Negative binomial tail probabilities..." negbinomialProbabilities "" "" item negbinomialMenu command "Negative binomial probabilities..." negbinomialMass "" "" item negbinomialMenu command "Plot negative binomial distribution..." negbinomialDistributionPlot "" "" item negbinomialMenu command "Sample from negative binomial distribution..." negbinomialDistributionSamples "" "" item distributionsMenu cascade "Continuous distributions" continuousMenu "" "" item distributionsMenu cascade "Discrete distributions" discreteMenu "" "" item topMenu cascade "Distributions" distributionsMenu "" "" menu toolsMenu topMenu "" "" "" "" item toolsMenu command "Load package(s)..." loadPackages "" "" item toolsMenu command "Options..." Options "" "" item topMenu cascade "Tools" toolsMenu "" "" menu helpMenu topMenu "" "" "" "" item helpMenu command "Commander help" helpCommander "" "" item helpMenu command "Introduction to the R Commander" browseManual "" "" item helpMenu command "Help on active data set (if available)" helpDataSet "activeDataSetP()" "" item helpMenu command "About Rcmdr" helpAboutCommander "" "" item topMenu cascade "Help" helpMenu "" ""